PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIUR3_16992-P1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 455aa    MW: 49221.6 Da    PI: 6.1194
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIUR3_16992-P1genomeBGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH27.17.4e-09274322355
                      HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
              HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       +h+ +Er RR++i +++  L++l+P +    sk   Ka +L + ++Y++sLq
  TRIUR3_16992-P1 274 NSHSLAERVRREKISERMKFLQDLVPGC----SKVIGKAVMLDEIINYVQSLQ 322
                      58*************************9....566*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000833.32E-10269326No hitNo description
SuperFamilySSF474591.3E-16269339IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.205271321IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000105.2E-6274322IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.103.1E-16274336IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003532.4E-9277327IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 455 aa     Download sequence    Send to blast
METNEKNAAD LEDKNQPSGH GQQPSFHGPG FSLSPEAQMD SSSSALAAMG NPFPPGLWNP  60
PGQNFGLGET NTNAMLNGHQ FSSFLGMLSA ATPAYPGAQS GFMDCGAGFP GLSANSLGAM  120
MDHPFSRNPA MGSFQNDIET SREMNVDEGC KDALLTGDRQ QGDTESSHGV DASSKELSKP  180
ECSGGAGQDE GPSVSCPKKR KRPSQDRGVK HVQEGSQQLA TLAAKQEKDD DDKDEPKRPI  240
GTSRKSNGKQ TEDKSDAPKE DYIHIRARSG QATNSHSLAE RVRREKISER MKFLQDLVPG  300
CSKVIGKAVM LDEIINYVQS LQRQVEFLSM KLSAVNPALD FNIERILSKD LFQSQGTASS  360
TFGFLPDIGH QFLHPPKHSQ AALHSIVNPA DAFGRVTNAP VGCTFKEATH QHLRYPIEAL  420
SSDVPFAIGG SWRSDSRDVH MEISSFTFSS ENLRV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1196202PKKRKRP
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00660PBMTransfer from Pp3c6_9520Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAK3691070.0AK369107.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2085G12.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003563957.10.0PREDICTED: transcription factor bHLH49
TrEMBLM7ZE440.0M7ZE44_TRIUA; Transcription factor bHLH49
STRINGMLOC_65318.20.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP146241923
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G68920.34e-62bHLH family protein